Assuming you upgraded both gphoto2 and libgphoto2 together, I can't imagine you did anything wrong to get that. It looks like gphoto2 -L is seriously messed up. Your 2nd entry /store_00010001/191CANON isn't even a valid path according to the standard. What kind of Canon camera is this? (Looks like it has internal memory plus a memory card, and I didn't think Canon did that.)
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