Just to let everyone know.
I missed one important bit when trying to upgrade the old CentOS 6.6 version.
At installation time I didn't realize that it skipped the old disks since there was an old RAID metadata on them.
I did 'dmraid -r -E' and rebooted still the same thing, tried that again and after a new reboot, the disks could be used and I tried an upgrade that just took no more then a few seconds,
after a reboot the new CentOS 6.9 worked perfectly
Off course you guys can't fix my problem when you don't know all the info but if I saw that info and took a notice of that IMPORTANT info I would have fixed it myself, so sorry for that.
Just to let everyone else know that might be using an old HighPoint RockRaid 2340 (rr2340), one dude at github has created patches so you can get the rr2340 working on kernel up to version 4x.
They are for Gentoo but just use the patches for any distro.
I haven't tried them yet due to a 'non working brain' that I won't even mention here just not to be laughed at
but he says he's using that himself and they are working perfectly
When I get this system up and running I will do that thing you recommend me, upgrade to CentOS 7
RockRaid rr2340 patches on github:
https://github.com/dsiggi/RocketRAID for kernel 3.11 and 4x
OAO