It sounds like you had Debian mount things to a local path, so that only Debian processes could see it at that path. If you want processes from all strata to see the mount, the mount point needs to be global. You can either move the mount to somewhere that's already global (such as your home directory, which is apparently what you did), or configure Bedrock to make the desired mount point path global.
You might be a bit confused about the following concepts:
- There is nothing special about the hijack stratum. After the install, it's just another stratum.
- Local vs global file paths.
- The root directory is a local path.
If you have not yet already done so, consider going through:
If you have already gone through these, consider doing so again with the recent event in mind with an eye on the local vs global concept.